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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3422809_3423287_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3422809 - 3423287

Intron Length:

479

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCCAC

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

CAAGCCTCACCA

Flanking Amino Acid:

QEKFKRQKYEINVLRNRVSD

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

68.4

38.7

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

86.3

0.82

0.8

77.9

35.9

Minor 5ss

32.7

-2

45.6

Minor BPS

46.1

-0.2

1.9

53.48

44.6

Associated Gene:

Gene:

TNNT2

Ensembl Gene ID:

ENSAPLG00000012741

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013323

3421420 - 3429662

8243