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Intron Name: Anas_platyrhynchos_platyrhynchos_27_342301_346091_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

342301 - 346091

Intron Length:

3791

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAATGTTT

5'SS Class:

weak_major

3'SS Sequence:

CCCCCTGCTGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGGAGAC

U12 Branch Point Sequence:

GCGGCGGAGACC

Flanking Amino Acid:

MSDPAGSVDPEPQHPHPLLV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.4

0.27

1.2

65.7

40.4

Major BPS

40.8

-0.5

1.1

27.5

33.2

Major PPT

49.5

-0

1.7

56.4

33.5

Minor 5ss

45.6

-0.5

3.4

74.4

41.7

Minor BPS

32.1

-1.4

2.5

37.08

41.5

Associated Gene:

Gene:

KCNA3

Ensembl Gene ID:

ENSAPLG00000020383

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035077

339230 - 346178

6949