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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3424613_3424874_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3424613 - 3424874

Intron Length:

262

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATC|GTATGTCTG

5'SS Class:

weak_major

3'SS Sequence:

TCTCCTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGATGAC

U12 Branch Point Sequence:

TGACCTGGGACA

Flanking Amino Acid:

EELISLKDRIEQRRAERAEQ

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.28

1.3

46.3

Major BPS

46.8

-0.2

1.3

37.2

42.1

Major PPT

82.8

0.74

0.7

77.1

24.8

Minor 5ss

45.4

-0.5

2.7

40.1

Minor BPS

43.1

-0.5

2.1

54.05

Associated Gene:

Gene:

TNNT2

Ensembl Gene ID:

ENSAPLG00000012741

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013323

3421420 - 3429662

8243