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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3426275_3426671_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3426275 - 3426671

Intron Length:

397

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGCAG

5'SS Class:

major

3'SS Sequence:

GTGTGTTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTCCAA

U12 Branch Point Sequence:

GTTCCAAGCACC

Flanking Amino Acid:

QEDETKAPGEGGEGDREQEP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

62.9

43.2

Major BPS

50.4

0.01

1.4

64.5

42.8

Major PPT

71.7

0.49

65.5

Minor 5ss

29.5

-2.4

3.3

37.6

47.1

Minor BPS

40.3

-0.7

2.2

56.44

40.9

Associated Gene:

Gene:

TNNT2

Ensembl Gene ID:

ENSAPLG00000012741

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013323

3421420 - 3429662

8243