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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3435943_3436533_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3435943 - 3436533

Intron Length:

591

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGAGGAT

U12 Branch Point Sequence:

GTCTCCTTGCCT

Flanking Amino Acid:

RSSPRTVSFRVISKKQKEED

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

68.7

36.4

Major BPS

-0.4

1.4

34.8

42.2

Major PPT

82.1

0.72

0.9

73.5

41.8

Minor 5ss

30.3

-2.3

3.2

31.5

42.2

Minor BPS

48.6

-0

3.5

79.9

42.3

Associated Gene:

Gene:

LAD1

Ensembl Gene ID:

ENSAPLG00000021537

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043273

3432018 - 3438021

6004

ENSAPLT00000020905

3432018 - 3443265

11248

ENSAPLT00000018153

3432018 - 3443265

11248