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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3438022_3443121_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3438022 - 3443121

Intron Length:

5100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCACCCCAAACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACCTTAT

U12 Branch Point Sequence:

ACGACCTTATGT

Flanking Amino Acid:

YSRRNWSDLSSLAKQRTLED

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

0.5

59.6

38.6

Major PPT

0.16

50.9

31.4

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

48.3

-0

62.67

47.2

Associated Gene:

Gene:

LAD1

Ensembl Gene ID:

ENSAPLG00000021537

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020905

3432018 - 3443265

11248

ENSAPLT00000018153

3432018 - 3443265

11248