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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3453855_3453943_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3453855 - 3453943

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTTTC

5'SS Class:

major

3'SS Sequence:

GCTTGGCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTCAG

U12 Branch Point Sequence:

CCGGCATTCAGC

Flanking Amino Acid:

TSGLSLSQLQDLCRELHEKV

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

76.8

32.7

Major BPS

55.9

0.15

1.5

39.8

Major PPT

65.1

0.34

54.2

41.5

Minor 5ss

53.3

0.11

2.3

70.3

40.3

Minor BPS

39.1

-0.8

2.2

42.13

45.1

Associated Gene:

Gene:

TNNI1

Ensembl Gene ID:

ENSAPLG00000021735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042967

3450278 - 3454610

4333