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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3484517_3508507_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3484517 - 3508507

Intron Length:

23991

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCGGCG

5'SS Class:

major

3'SS Sequence:

CTTTCTCCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCTT

U12 Branch Point Sequence:

TCTTCCCTCCCC

Flanking Amino Acid:

NVDGLTALHQACIDENLDMV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.5

0.34

1.3

53.2

Major BPS

-1

4.2

69.4

37.7

Major PPT

0.74

0.7

81.1

Minor 5ss

-1.8

3.7

47.7

Minor BPS

39.7

-0.8

3.7

66.79

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028831

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026092

3484229 - 3509152

24924

ENSAPLT00000042230

3484229 - 3510705

26477