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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3581399_3581882_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3581399 - 3581882

Intron Length:

484

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGCATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TGGTGCTAGATC

Flanking Amino Acid:

AKTLRHERLSRLEAATNPTP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.5

1.02

0.7

25.3

Major BPS

0.62

1.4

85.7

34.9

Major PPT

77.3

0.61

0.8

74.5

Minor 5ss

36.4

-1.5

3.6

55.7

48.5

Minor BPS

46.5

-0.3

2.1

57.61

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028213

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030682

3574649 - 3594332

19684

ENSAPLT00000027542

3568718 - 3594332

25615