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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3582037_3582581_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3582037 - 3582581

Intron Length:

545

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATTT

5'SS Class:

strong_major

3'SS Sequence:

GTTCATATTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCATAT

U12 Branch Point Sequence:

GTTAATTGAAAT

Flanking Amino Acid:

EEESNRDYKKLYESALSENQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

81.6

33.2

Major BPS

74.2

0.6

69.3

38.4

Major PPT

78.1

0.63

0.9

74.2

39.9

Minor 5ss

42.5

-0.8

3.4

64.3

47.2

Minor BPS

48.7

-0

1.7

69.27

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028213

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030682

3574649 - 3594332

19684

ENSAPLT00000027542

3568718 - 3594332

25615