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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3582687_3582958_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3582687 - 3582958

Intron Length:

272

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

TTAATTTGCATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTATTTTTAATT

Flanking Amino Acid:

IKSKLEKAAQQKQEKTSDRS

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.6

42.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

68.8

0.42

Minor 5ss

30.1

-2.3

3.2

37.6

47.1

Minor BPS

72.1

0.77

1.2

79.64

37.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028213

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030682

3574649 - 3594332

19684

ENSAPLT00000027542

3568718 - 3594332

25615