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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3584999_3593389_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

3584999 - 3593389

Intron Length:

8391

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAAGA

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTTGCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAC

U12 Branch Point Sequence:

CGAGCTGTAACC

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

71.7

40.1

Major BPS

62.2

0.3

1.2

38.7

Major PPT

76.2

0.59

0.9

72.4

37.6

Minor 5ss

32.4

-2

2.9

32.3

Minor BPS

46.9

-0.2

2.1

55.17

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028213

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030682

3574649 - 3594332

19684

ENSAPLT00000027542

3568718 - 3594332

25615