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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3600548_3601037_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3600548 - 3601037

Intron Length:

490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTCGTACG

5'SS Class:

major

3'SS Sequence:

CTTTCTCCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

CCCCTCTAAAGA

Flanking Amino Acid:

SFEIPFEQIQKVQVVITVLD

Intron Amino Acid Position:

376

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.2

67.6

43.3

Major BPS

0.57

73.6

28.6

Major PPT

85.6

0.8

0.7

77.5

31.3

Minor 5ss

31.3

-2.1

2.6

35.5

40.5

Minor BPS

43.9

-0.4

1.9

47.02

43.6

Associated Gene:

Gene:

SYT2

Ensembl Gene ID:

ENSAPLG00000011038

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011495

3599501 - 3604371

4871