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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3601172_3601628_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3601172 - 3601628

Intron Length:

457

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGATCG

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGCCAT

U12 Branch Point Sequence:

GCACTGCCATCT

Flanking Amino Acid:

LKKMDVGGLSDPYVKIHLLQ

Intron Amino Acid Position:

331

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.8

71.2

35.2

Major BPS

49.9

-0

1.4

61.8

44.5

Major PPT

77.4

0.62

0.7

69.1

31.5

Minor 5ss

32.8

-2

39.2

46.2

Minor BPS

31.8

-1.3

2.2

43.66

39.9

Associated Gene:

Gene:

SYT2

Ensembl Gene ID:

ENSAPLG00000011038

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011495

3599501 - 3604371

4871