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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3601747_3602104_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3601747 - 3602104

Intron Length:

358

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

CCCCGTTTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

AGGCTCTGATTC

Flanking Amino Acid:

RDLQSGEKEEPEKLGDICIS

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

65.9

40.1

Major BPS

0.72

38.9

Major PPT

67.7

0.4

63.5

36.9

Minor 5ss

24.4

-2.9

3.1

29.4

43.3

Minor BPS

44.2

-0.4

1.6

47.52

35.6

Associated Gene:

Gene:

SYT2

Ensembl Gene ID:

ENSAPLG00000011038

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011495

3599501 - 3604371

4871