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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3702367_3703712_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3702367 - 3703712

Intron Length:

1346

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

TTCTCGATTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAA

U12 Branch Point Sequence:

TTTTTCTCGATT

Flanking Amino Acid:

GQWTEWKTEGRLPVARSAHG

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.8

78.6

37.2

Major BPS

67.7

0.44

58.3

38.4

Major PPT

75.5

0.57

0.9

70.2

Minor 5ss

31.6

-2.1

3.1

38.7

46.6

Minor BPS

0.68

1.5

86.75

32.9

Associated Gene:

Gene:

LZTR1

Ensembl Gene ID:

ENSAPLG00000009376

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029201

3671800 - 3705625

33826

ENSAPLT00000009824

3672901 - 3705625

32725