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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3709501_3710079_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3709501 - 3710079

Intron Length:

579

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGATGCTC

5'SS Class:

major

3'SS Sequence:

GTCTCCCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTGAT

U12 Branch Point Sequence:

GTGATGCTAACT

Flanking Amino Acid:

KDPLYQIDLQAYLTDFLCQF

Intron Amino Acid Position:

1004

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

65.8

39.9

Major BPS

64.7

0.36

1.2

55.1

42.1

Major PPT

0.65

0.8

69.5

36.8

Minor 5ss

29.9

-2.3

3.4

41.5

45.2

Minor BPS

-0.3

2.3

65.75

44.5

Associated Gene:

Gene:

IPO9

Ensembl Gene ID:

ENSAPLG00000008676

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027564

3709390 - 3738428

29039

ENSAPLT00000009090

3709390 - 3738456

29067