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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3709535_3710968_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3709535 - 3710968

Intron Length:

1434

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAACAACT

5'SS Class:

major

3'SS Sequence:

TTGTGAAGTGAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

AATTTGTGAAGT

Flanking Amino Acid:

SDILSTNKYGNDANWIFLSP

Intron Amino Acid Position:

979

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.2

71.9

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

54.7

0.11

1.2

54.2

44.1

Minor 5ss

43.4

-0.7

2.9

59.9

38.3

Minor BPS

-0.2

2.3

67.94

42.8

Associated Gene:

Gene:

IPO9

Ensembl Gene ID:

ENSAPLG00000008676

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036414

3709390 - 3738456

29067