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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3710157_3710972_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3710157 - 3710972

Intron Length:

816

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTGCCTCTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TTGTTGTTAAAA

Flanking Amino Acid:

LSDILSTNKYDEDYYEDDEE

Intron Amino Acid Position:

978

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.8

83.2

28.5

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

72.6

0.51

68.6

37.3

Minor 5ss

36.2

-1.6

2.7

42.6

38.5

Minor BPS

56.2

0.19

2.1

71.86

40.4

Associated Gene:

Gene:

IPO9

Ensembl Gene ID:

ENSAPLG00000008676

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009090

3709390 - 3738456

29067