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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3710460_3712334_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3710460 - 3712334

Intron Length:

1875

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAATTACT

5'SS Class:

major

3'SS Sequence:

ACCCTGGCATAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTACAT

U12 Branch Point Sequence:

TAGCACAGAAGT

Flanking Amino Acid:

IRTRSKSAKSKSRLKIKSAR

Intron Amino Acid Position:

905

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

80.1

32.5

Major BPS

70.4

0.51

1.1

78.7

33.6

Major PPT

48.7

-0

1.1

49.4

37.8

Minor 5ss

40.2

-1.1

2.8

53.3

37.2

Minor BPS

41.2

-0.5

58.09

43.7

Associated Gene:

Gene:

IPO9

Ensembl Gene ID:

ENSAPLG00000008676

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020878

3710426 - 3738456

28031