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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3719127_3719891_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3719127 - 3719891

Intron Length:

765

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

GTATCTTGCCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATGTATCT

Flanking Amino Acid:

VRISAVRAIWGYCDQLKISE

Intron Amino Acid Position:

543

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

74.1

38.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

64.9

0.34

58.1

42.9

Minor 5ss

38.3

-1.3

2.8

40.3

45.6

Minor BPS

49.4

0.03

2.4

80.49

41.6

Associated Gene:

Gene:

IPO9

Ensembl Gene ID:

ENSAPLG00000008676

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035044

3717551 - 3738456

20906

ENSAPLT00000027564

3709390 - 3738428

29039

ENSAPLT00000020878

3710426 - 3738456

28031

ENSAPLT00000009090

3709390 - 3738456

29067

ENSAPLT00000036414

3709390 - 3738456

29067