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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3721129_3722304_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3721129 - 3722304

Intron Length:

1176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGAGA

5'SS Class:

strong_major

3'SS Sequence:

AATTCATTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

AATTCATTTACA

Flanking Amino Acid:

EQAKNNGAEHWWKIHEACML

Intron Amino Acid Position:

443

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

71.4

40.1

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

77.6

0.62

0.9

39.6

Minor 5ss

31.8

-2.1

3.1

36.7

42.5

Minor BPS

59.6

0.3

1.9

72.55

38.8

Associated Gene:

Gene:

IPO9

Ensembl Gene ID:

ENSAPLG00000008676

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035044

3717551 - 3738456

20906

ENSAPLT00000027564

3709390 - 3738428

29039

ENSAPLT00000020878

3710426 - 3738456

28031

ENSAPLT00000009090

3709390 - 3738456

29067

ENSAPLT00000036414

3709390 - 3738456

29067