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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3729503_3731081_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3729503 - 3731081

Intron Length:

1579

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGAGTG

5'SS Class:

strong_major

3'SS Sequence:

TGATTTTTACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTGAC

U12 Branch Point Sequence:

CTGCCTTGAATT

Flanking Amino Acid:

MICNMEELEKGAAKVLIFPV

Intron Amino Acid Position:

231

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.9

81.3

Major BPS

69.9

0.49

0.9

61.1

36.4

Major PPT

76.6

0.6

70.5

44.2

Minor 5ss

23.7

-3

4.2

37.5

47.2

Minor BPS

57.5

0.32

1.5

69.84

41.7

Associated Gene:

Gene:

IPO9

Ensembl Gene ID:

ENSAPLG00000008676

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035044

3717551 - 3738456

20906

ENSAPLT00000027564

3709390 - 3738428

29039

ENSAPLT00000020878

3710426 - 3738456

28031

ENSAPLT00000009090

3709390 - 3738456

29067

ENSAPLT00000036414

3709390 - 3738456

29067