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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3732986_3733639_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3732986 - 3733639

Intron Length:

654

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTAATACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TCTCTTCTAATA

Flanking Amino Acid:

DPQGALAIRQLASVILKQYV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.04

0.7

89.2

17.6

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

0.65

0.9

73.7

34.6

Minor 5ss

38.3

-1.3

2.9

47.2

Minor BPS

52.8

0.08

1.6

64.52

36.3

Associated Gene:

Gene:

IPO9

Ensembl Gene ID:

ENSAPLG00000008676

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009090

3709390 - 3738456

29067

ENSAPLT00000036414

3709390 - 3738456

29067

ENSAPLT00000035044

3717551 - 3738456

20906

ENSAPLT00000027564

3709390 - 3738428

29039

ENSAPLT00000020878

3710426 - 3738456

28031