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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3738263_3738373_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3738263 - 3738373

Intron Length:

111

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTG|GCGCGCGGC

5'SS Class:

major

3'SS Sequence:

GGCGGCGGCGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGCGGGC

U12 Branch Point Sequence:

GCGGCGGCGGCG

Flanking Amino Acid:

AGCARAVRAFGNGGGGGGGG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.9

0.33

1.2

57.7

Major BPS

9.5

-2.5

3.6

14.2

22.8

Major PPT

40.1

-0.5

1.6

30.1

36.6

Minor 5ss

-3.5

28.8

38.6

Minor BPS

17.1

-2.7

3.4

22.21

36.8

Associated Gene:

Gene:

IPO9

Ensembl Gene ID:

ENSAPLG00000008676

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027564

3709390 - 3738428

29039