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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3745206_3745868_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3745206 - 3745868

Intron Length:

663

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTCCATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAA

U12 Branch Point Sequence:

CTTCTCTGAACC

Flanking Amino Acid:

VNCLQPEGDEVDWVQCDGSC

Intron Amino Acid Position:

1477

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

1.2

83.2

30.8

Major BPS

69.8

0.49

37.5

Major PPT

72.3

0.5

0.9

71.9

Minor 5ss

30.5

-2.2

2.5

33.7

41.5

Minor BPS

64.7

0.44

1.5

72.43

38.4

Associated Gene:

Gene:

KDM5B

Ensembl Gene ID:

ENSAPLG00000007715

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008058

3742068 - 3792601

50534