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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3748049_3750135_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3748049 - 3750135

Intron Length:

2087

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACTG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTTAT

U12 Branch Point Sequence:

TATGCATTATGT

Flanking Amino Acid:

TAGHLPETNKVSQTIGAMSF

Intron Amino Acid Position:

1279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

75.5

40.6

Major BPS

72.5

0.56

1.2

63.4

Major PPT

87.4

0.84

0.7

81.2

36.5

Minor 5ss

35.6

-1.6

3.2

47.4

Minor BPS

47.2

-0.1

2.2

70.18

46.3

Associated Gene:

Gene:

KDM5B

Ensembl Gene ID:

ENSAPLG00000007715

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008058

3742068 - 3792601

50534