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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3752004_3753745_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3752004 - 3753745

Intron Length:

1742

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TATAATCTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

ATTTCCTCATTT

Flanking Amino Acid:

DWLQEVESLQVGGRVPVLDT

Intron Amino Acid Position:

1004

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.89

0.9

83.2

30.8

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

67.4

0.39

1.1

61.8

43.8

Minor 5ss

33.6

-1.9

41.3

45.3

Minor BPS

63.6

0.51

1.8

82.82

38.6

Associated Gene:

Gene:

KDM5B

Ensembl Gene ID:

ENSAPLG00000007715

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008058

3742068 - 3792601

50534