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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3754642_3755461_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3754642 - 3755461

Intron Length:

820

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTGG

5'SS Class:

strong_major

3'SS Sequence:

TTATATATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TGATGTTGAAAT

Flanking Amino Acid:

CVLSQTPLLKDLLDRVEAFQ

Intron Amino Acid Position:

839

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

1.1

69.7

43.7

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

81.3

0.7

0.9

78.5

39.2

Minor 5ss

45.1

-0.5

2.6

58.7

45.8

Minor BPS

48.3

-0

1.9

67.96

42.3

Associated Gene:

Gene:

KDM5B

Ensembl Gene ID:

ENSAPLG00000007715

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008058

3742068 - 3792601

50534