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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3755577_3758143_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3755577 - 3758143

Intron Length:

2567

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGTT

5'SS Class:

strong_major

3'SS Sequence:

TGTGCATTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTTAT

U12 Branch Point Sequence:

TGGCATAGAACA

Flanking Amino Acid:

QQLLNGKRQTRYRSGGGKSQ

Intron Amino Acid Position:

800

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

87.7

26.2

Major BPS

72.5

0.56

1.2

63.4

Major PPT

77.1

0.61

0.9

69.9

40.4

Minor 5ss

-1.4

3.5

57.8

46.8

Minor BPS

43.1

-0.5

1.8

52.89

38.4

Associated Gene:

Gene:

KDM5B

Ensembl Gene ID:

ENSAPLG00000007715

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008058

3742068 - 3792601

50534