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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3759548_3759956_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3759548 - 3759956

Intron Length:

409

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAA

U12 Branch Point Sequence:

TTTGTTAGACTT

Flanking Amino Acid:

KMLREKVQKLGVTDSERVAF

Intron Amino Acid Position:

648

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

76.6

34.9

Major BPS

74.8

0.62

39.8

Major PPT

90.2

0.9

0.7

88.4

28.7

Minor 5ss

36.6

-1.5

2.9

46.4

44.2

Minor BPS

42.9

-0.4

1.9

64.49

40.9

Associated Gene:

Gene:

KDM5B

Ensembl Gene ID:

ENSAPLG00000007715

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008058

3742068 - 3792601

50534