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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3765336_3765744_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3765336 - 3765744

Intron Length:

409

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTCTT

5'SS Class:

strong_major

3'SS Sequence:

GTTCAATTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

TGTTGTTTAAAC

Flanking Amino Acid:

GKFKVRPEEEEYLDSGWNLN

Intron Amino Acid Position:

428

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

81.8

38.5

Major BPS

78.6

0.71

79.6

32.9

Major PPT

78.2

0.63

0.9

73.9

40.3

Minor 5ss

38.8

-1.3

3.4

58.1

46.5

Minor BPS

60.4

0.31

1.9

72.23

38.8

Associated Gene:

Gene:

KDM5B

Ensembl Gene ID:

ENSAPLG00000007715

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008058

3742068 - 3792601

50534