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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3767129_3768358_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3767129 - 3768358

Intron Length:

1230

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTATG

5'SS Class:

major

3'SS Sequence:

TTTCTTGTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAA

U12 Branch Point Sequence:

AAGTGCTCAAAT

Flanking Amino Acid:

KARSKKPTNAVDLYVCLLCG

Intron Amino Acid Position:

282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.1

71.2

40.3

Major BPS

70.6

0.51

1.1

71.6

36.4

Major PPT

88.4

0.86

0.8

83.5

31.6

Minor 5ss

36.8

-1.5

2.9

52.3

44.3

Minor BPS

47.9

-0

65.46

44.5

Associated Gene:

Gene:

KDM5B

Ensembl Gene ID:

ENSAPLG00000007715

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008058

3742068 - 3792601

50534