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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3768463_3770190_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3768463 - 3770190

Intron Length:

1728

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CCTATTGCACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

CGTTTTGTAATA

Flanking Amino Acid:

MGCAPPKCENEKEMYSSVKL

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

68.4

36.9

Major BPS

84.4

0.85

1.1

34.5

Major PPT

66.2

0.37

58.5

41.8

Minor 5ss

27.7

-2.6

31.6

37.6

Minor BPS

49.8

-0

62.57

38.8

Associated Gene:

Gene:

KDM5B

Ensembl Gene ID:

ENSAPLG00000007715

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008058

3742068 - 3792601

50534