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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3770285_3772660_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3770285 - 3772660

Intron Length:

2376

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGATAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTGTTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CGGTTTTTAATT

Flanking Amino Acid:

ARRAKRLRAEATNMKSESEP

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.8

79.1

24.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.4

0.55

1.1

74.5

39.3

Minor 5ss

31.8

-2.1

37.8

Minor BPS

65.2

0.56

1.3

71.32

40.7

Associated Gene:

Gene:

KDM5B

Ensembl Gene ID:

ENSAPLG00000007715

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008058

3742068 - 3792601

50534