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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3828922_3829365_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3828922 - 3829365

Intron Length:

444

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

CCCCCCCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTGAT

U12 Branch Point Sequence:

GGGTGGTGATGT

Flanking Amino Acid:

PGAATFARRELLLPAMKKKA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

66.1

0.4

1.3

57.1

49.4

Major PPT

66.9

0.38

0.7

57.1

27.1

Minor 5ss

26.2

-2.7

2.9

30.6

42.9

Minor BPS

32.2

-1.2

2.4

45.83

45.3

Associated Gene:

Gene:

RABIF

Ensembl Gene ID:

ENSAPLG00000027144

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046419

3827891 - 3829605

1715