Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_27_3836486_3837535_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3836486 - 3837535

Intron Length:

1050

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAGGTACC

5'SS Class:

major

3'SS Sequence:

TCTTTCGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTCAG

U12 Branch Point Sequence:

GAACTCAGACCC

Flanking Amino Acid:

VVANGVIYCLGGYDGLNILN

Intron Amino Acid Position:

422

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

70.1

40.6

Major BPS

54.4

0.11

1.4

63.4

35.6

Major PPT

86.5

0.82

0.8

84.4

30.5

Minor 5ss

36.1

-1.6

47.1

41.5

Minor BPS

39.8

-0.7

1.7

44.81

35.8

Associated Gene:

Gene:

KLHL12

Ensembl Gene ID:

ENSAPLG00000007219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007509

3831830 - 3852266

20437