Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_27_3838871_3839833_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3838871 - 3839833

Intron Length:

963

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTAAGGGAC

5'SS Class:

major

3'SS Sequence:

TTGGCCCTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTTAT

U12 Branch Point Sequence:

CTCTCCTTGACC

Flanking Amino Acid:

PKTQEWSFLPSITRKRRYVA

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.5

0.32

1.4

58.7

40.8

Major BPS

71.5

0.54

1.1

63.3

42.8

Major PPT

73.6

0.53

0.9

70.5

36.2

Minor 5ss

31.4

-2.1

3.6

45.2

43.4

Minor BPS

77.5

0.85

1.2

77.61

Associated Gene:

Gene:

KLHL12

Ensembl Gene ID:

ENSAPLG00000007219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007509

3831830 - 3852266

20437