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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3843850_3846386_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3843850 - 3846386

Intron Length:

2537

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAACCT

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTGAT

U12 Branch Point Sequence:

GCGGTCTGATCG

Flanking Amino Acid:

EKLIKCDEIQVDSEEPVFEA

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.4

38.4

Major BPS

73.6

0.59

1.2

65.3

43.7

Major PPT

84.1

0.77

0.7

32.5

Minor 5ss

-1.8

3.3

49.1

46.6

Minor BPS

42.4

-0.7

1.8

39.92

Associated Gene:

Gene:

KLHL12

Ensembl Gene ID:

ENSAPLG00000007219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007509

3831830 - 3852266

20437