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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3869710_3871819_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3869710 - 3871819

Intron Length:

2110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACTGGTT

5'SS Class:

major

3'SS Sequence:

TCCCCCTTCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTAAA

U12 Branch Point Sequence:

GTCACCTAAAAG

Flanking Amino Acid:

PFTKESFPKMRVLEVPYAYQ

Intron Amino Acid Position:

451

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

69.9

40.6

Major BPS

63.9

0.35

63.9

30.3

Major PPT

77.1

0.61

0.7

71.8

26.2

Minor 5ss

34.2

-1.8

3.9

55.6

48.6

Minor BPS

48.7

-0.2

1.9

54.19

46.2

Associated Gene:

Gene:

LGR6

Ensembl Gene ID:

ENSAPLG00000006712

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006999

3863007 - 3988466

125460