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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3872524_3879751_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3872524 - 3879751

Intron Length:

7228

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTGAGTGGC

5'SS Class:

major

3'SS Sequence:

AGAAACTGCCCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTAGAAA

U12 Branch Point Sequence:

ACCTGCTTACTC

Flanking Amino Acid:

DLKGTTSLEVLYRLKHLPPG

Intron Amino Acid Position:

328

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

61.4

37.6

Major BPS

53.7

0.09

1.4

64.3

39.6

Major PPT

50.7

0.02

1.1

39.6

43.6

Minor 5ss

30.2

-2.3

3.2

40.4

40.1

Minor BPS

47.7

-0.1

55.61

43.7

Associated Gene:

Gene:

LGR6

Ensembl Gene ID:

ENSAPLG00000006712

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006999

3863007 - 3988466

125460