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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3879821_3879984_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3879821 - 3879984

Intron Length:

164

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTTCA

5'SS Class:

major

3'SS Sequence:

CATTTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTCAC

U12 Branch Point Sequence:

TCACCCTCATTT

Flanking Amino Acid:

AFQYLPKLHTLSLNGATDIK

Intron Amino Acid Position:

305

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.1

35.3

Major BPS

68.4

0.46

0.9

69.3

26.9

Major PPT

83.2

0.75

0.8

77.4

30.9

Minor 5ss

43.4

-0.7

2.8

60.6

43.7

Minor BPS

49.3

0.03

1.8

66.66

Associated Gene:

Gene:

LGR6

Ensembl Gene ID:

ENSAPLG00000006712

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033701

3879601 - 3989829

110229

ENSAPLT00000006999

3863007 - 3988466

125460