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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3882530_3895223_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3882530 - 3895223

Intron Length:

12694

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTCAC

5'SS Class:

major

3'SS Sequence:

CTCTGTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

GCAACATTAATG

Flanking Amino Acid:

GFDGLHNLETLDLNYNELLE

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.1

61.7

38.8

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

83.2

0.75

0.8

80.3

31.8

Minor 5ss

-2.1

45.5

42.6

Minor BPS

49.6

-0.1

1.7

51.21

42.8

Associated Gene:

Gene:

LGR6

Ensembl Gene ID:

ENSAPLG00000006712

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033701

3879601 - 3989829

110229

ENSAPLT00000006999

3863007 - 3988466

125460