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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3895296_3904256_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3895296 - 3904256

Intron Length:

8961

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGCCTT

5'SS Class:

major

3'SS Sequence:

GCTTTGTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

TCTCCACTGACC

Flanking Amino Acid:

AFQNLSSLVVLHLHNNRIQR

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.2

45.2

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

74.9

0.56

0.9

68.9

37.1

Minor 5ss

46.7

-0.3

3.2

75.5

39.8

Minor BPS

-0

65.75

39.6

Associated Gene:

Gene:

LGR6

Ensembl Gene ID:

ENSAPLG00000006712

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033701

3879601 - 3989829

110229

ENSAPLT00000006999

3863007 - 3988466

125460