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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3904473_3920207_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3904473 - 3920207

Intron Length:

15735

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTCAT

5'SS Class:

major

3'SS Sequence:

CTTTCCCACTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTTAT

U12 Branch Point Sequence:

TCTCACTTATCC

Flanking Amino Acid:

ALRDLPNLQSLRLDANLISV

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.59

1.1

71.3

40.3

Major BPS

71.3

0.53

61.3

Major PPT

0.58

0.8

29.9

Minor 5ss

38.8

-1.3

3.1

60.2

44.1

Minor BPS

56.7

0.19

1.8

68.95

42.2

Associated Gene:

Gene:

LGR6

Ensembl Gene ID:

ENSAPLG00000006712

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033701

3879601 - 3989829

110229

ENSAPLT00000006999

3863007 - 3988466

125460