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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3920376_3984807_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3920376 - 3984807

Intron Length:

64432

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

ACCAAGGGTTCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGACCAA

U12 Branch Point Sequence:

GCTTGCCTAAGA

Flanking Amino Acid:

PASLSPLTAYLAASQLQKQQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

36.3

Major BPS

46.5

-0.2

1.3

52.8

42.7

Major PPT

52.1

0.05

1.1

44.9

Minor 5ss

38.9

-1.2

2.7

53.8

42.8

Minor BPS

-0.3

2.3

60.45

45.3

Associated Gene:

Gene:

LGR6

Ensembl Gene ID:

ENSAPLG00000006712

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033701

3879601 - 3989829

110229