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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3939331_3984807_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3939331 - 3984807

Intron Length:

45477

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

TTTCTTCCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTGAT

U12 Branch Point Sequence:

TGATCCGAGATT

Flanking Amino Acid:

PASLSPLTAYLDLSMNNISQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

36.3

Major BPS

65.8

0.39

1.2

57.3

41.7

Major PPT

84.5

0.78

0.7

77.5

31.3

Minor 5ss

38.9

-1.2

2.7

53.8

42.8

Minor BPS

46.5

-0.1

2.3

68.14

43.2

Associated Gene:

Gene:

LGR6

Ensembl Gene ID:

ENSAPLG00000006712

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006999

3863007 - 3988466

125460