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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3984993_3988454_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3984993 - 3988454

Intron Length:

3462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGCTGCTG

5'SS Class:

weak_major

3'SS Sequence:

GAGGATGGAGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGAGGAT

U12 Branch Point Sequence:

CGCTCCCCACCG

Flanking Amino Acid:

LHSLLFWGVLLASS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.3

0.15

1.1

46.1

43.3

Major BPS

47.8

-0.1

1.5

45.5

47.5

Major PPT

47.4

-0.1

1.2

36.1

44.3

Minor 5ss

28.1

-2.5

3.5

43.4

Minor BPS

41.5

-0.7

2.1

44.84

46.8

Associated Gene:

Gene:

LGR6

Ensembl Gene ID:

ENSAPLG00000006712

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006999

3863007 - 3988466

125460