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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3991363_3993663_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3991363 - 3993663

Intron Length:

2301

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTGGC

5'SS Class:

major

3'SS Sequence:

TTCTCTTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

GACTCCAGAATC

Flanking Amino Acid:

RSCCLMTPTLDQYMFLYTCM

Intron Amino Acid Position:

2252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

1.1

65.5

39.9

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

88.2

0.86

0.6

87.7

22.4

Minor 5ss

31.8

-2.1

3.4

40.2

41.3

Minor BPS

49.3

-0

1.7

58.56

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005702

3991303 - 4022202

30900