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Intron Name: Anas_platyrhynchos_platyrhynchos_27_3995161_3995683_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3995161 - 3995683

Intron Length:

523

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGACAC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTGCGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGCCAA

U12 Branch Point Sequence:

CCACCACCAACA

Flanking Amino Acid:

TLLPWQEKGEVPADACWPLE

Intron Amino Acid Position:

2113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.8

75.1

35.1

Major BPS

44.6

-0.3

1.2

48.2

36.6

Major PPT

73.1

0.52

68.1

37.6

Minor 5ss

32.3

-2

3.1

41.7

Minor BPS

-0.6

48.29

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005702

3991303 - 4022202

30900